Showing posts with label Organelles. Show all posts
Showing posts with label Organelles. Show all posts

14 Oct 2020

Cellular Anatomy: Exploring the Intricacies of Cell Structures, Membranes, and Extracellular Environment

The cell, which is the fundamental structural and functional unit of the body, is the focus of cytology, a branch of science that studies cells.

The Cell Theory provides insights into the nature of cells, stating that:

a) All living organisms are made up of cells and cell products.

b) Cells are the basic units of structure and function in all living organisms.

c) Cells arise from the division of preexisting cells.

d) The collective activities and interactions of cells contribute to the understanding of the entire organism.

To gain a better understanding of cells, they can be divided into four main components:

Plasma (cell) membrane: This is the outer lining that separates the internal parts of the cell from the extracellular materials and the external environment.

Cytoplasm: This is the substance that surrounds organelles and is located between the nucleus and the plasma membrane.

Organelles: These are permanent structures with distinctive morphology that are highly specialized for specific cellular activities.

Inclusions: These are secretions and storage products of cells.

The extracellular materials, also known as the matrix, are substances found outside the cell surface.

The plasma membrane, a thin outer membrane, maintains the integrity of the cell by keeping its contents separate and distinct from the surrounding environment. It is a double layer composed of phospholipids, cholesterol, glycolipids, and carbohydrates (oligosaccharides) and is self-sealing, automatically sealing if punctured by a needle.

 

Functions of the plasma membrane include

Separating the cytoplasm inside the cell from the extracellular fluid.

Separating cells from one another.

Providing an abundant surface for chemical reactions to occur.

Regulating the passage of materials into and out of the cell, exhibiting selective permeability.

Movement across the cell membrane occurs in two ways: passive and active movements. Passive movement does not require energy, while active movement consumes ATP (adenosine triphosphate) energy.

Passive movement includes:

a) Simple diffusion: the random movement of molecules from areas of high concentration to areas of low concentration. An example is the exchange of gases in the alveoli of the lungs.

b) Facilitated diffusion: larger molecules that are not soluble in lipids require protein channels to pass through the plasma membrane. No direct energy is needed. An example is the transport of amino acids across the cell membrane.

c) Osmosis: a special type of diffusion referring to the passage of water through a selectively permeable membrane from an area of high water concentration to an area of low water concentration.

d) Filtration: small molecules pass through a selectively permeable membrane in response to pressure. An example is the filtration process in the kidneys during urine formation.

Active movements across membranes involve substances moving from areas of low concentration on one side of the membrane to areas of higher concentration on the other side. This movement occurs against the concentration gradient and requires energy.

Active transport occurs when equilibrium is reached and more molecules are needed. Substances are pumped through the membrane against the concentration gradient, requiring the use of ATP. Examples of active transport processes include the sodium-potassium pump and the calcium pump. In these processes, molecules bind to carrier proteins, and the molecule-carrier complex passes through the membrane, assisted by an enzyme and ATP. The carrier protein then returns to its original shape and repeats the process.

Endocytosis, which involves pocketing of the plasma membrane, includes:

a) Pinocytosis: cell drinking.

b) Receptor-mediated endocytosis: endocytosis facilitated by receptors.

c) Phagocytosis: cell eating.

Exocytosis is the opposite of endocytosis and involves the removal of undigested particles."

 

Cytoplasm

Cytoplasm is a matrix or ground substance in which various cellular components are found. It is a thick, semi-transparent, elastic fluid containing suspended particles and a series of minute tubules and filaments that form the cytoskeleton. Water constitutes 75-90% of the cytoplasm. It also contains solid components such as proteins, carbohydrates, lipids, and inorganic substances. The inorganic components exist as solutions because they are soluble in water. The majority of organic substances, however, are found as colloids, which are particles that remain suspended in the surrounding medium.

 

Organelles

Organelles are specialized portions of the cell with characteristic shapes that assume specific roles in growth, maintenance, repair, and control.

 

Nucleus

The nucleus is oval in shape and is the largest structure in the cell. It contains the hereditary factors in the cell; hence it controls cell activity and structure. Most cells contain a single nucleus, but some, like matured red blood cells, do not contain a nucleus. However, muscle cells contain several nuclei. The nucleus is separated from other cell structures by a double membrane called the nuclear membrane. Pores in the nuclear membrane allow the nucleus to communicate with the cytoplasm. The nucleus contains a jelly-like fluid that fills the nucleus called karyolymph (nucleoplasm), which contains the genetic material called chromosomes. The nucleus also contains a dark, somewhat spherical, non-membrane-bound mass called the nucleolus, which contains DNA, RNA, and protein that assist in the construction of ribosomes.

 

Ribosomes

Ribosomes are tiny granules composed of Ribosomal RNA (rRNA). They are the site of protein synthesis in the cell, where they use information from the DNA in the nucleus to synthesize proteins. Ribosomes can be found free in the cytoplasm or attached to the endoplasmic reticulum.

 

Endoplasmic Reticulum

The endoplasmic reticulum (ER) is a double-membrane channel system that is involved in protein synthesis, lipid metabolism, and detoxification of drugs and toxins. It can be classified into two types: rough endoplasmic reticulum (RER) and smooth endoplasmic reticulum (SER). RER has ribosomes attached to its surface, giving it a rough appearance, and is involved in protein synthesis and protein folding. SER lacks ribosomes and is involved in lipid metabolism, detoxification, and calcium storage.

 

Golgi Apparatus

The Golgi apparatus, also known as the Golgi complex or Golgi body, is a stack of flattened sacs that processes, modifies, and packages proteins and lipids synthesized in the ER for transport to their final destinations within or outside the cell. It plays a crucial role in intracellular transportation and secretion.

 

Mitochondria

Mitochondria are double-membraned organelles often referred to as the "powerhouses of the cell" because they are responsible for generating energy in the form of ATP through cellular respiration. They contain their own DNA and can self-replicate, suggesting that they originated from a symbiotic relationship between early eukaryotic cells and bacteria.

 

Lysosomes

Lysosomes are membrane-bound organelles that contain enzymes capable of breaking down cellular waste materials, cellular debris, and macromolecules. They play a crucial role in cellular waste disposal, recycling of cellular components, and the immune response.

 

Inclusions

Inclusions are secretions and storage products of cells. They can include pigments, crystals, and other substances that are not bound by a membrane. Inclusions are important for various cellular functions such as energy storage, pigment production, and detoxification.

 

Extracellular

Extracellular refers to the space outside the cell. It includes the interstitial fluid, which is the fluid that surrounds and bathes the cells in tissues, as well as other extracellular fluids such as blood plasma and lymph. The extracellular environment plays a critical role in cellular communication, nutrient exchange, waste elimination, and overall tissue function.

 

Cell Membrane

The cell membrane, also known as the plasma membrane, is a selectively permeable barrier that separates the interior of the cell from the extracellular environment. It consists of a phospholipid bilayer embedded with proteins and other molecules. The cell membrane controls the passage of substances in and out of the cell, allowing for the exchange of nutrients, gases, and waste products, as well as communication with neighboring cells and the external environment.

 

Cell Junctions

Cell junctions are specialized structures that connect cells together and play a role in tissue integrity and communication. There are several types of cell junctions, including tight junctions, desmosomes, and gap junctions. Tight junctions are found in epithelial tissues and form a seal between adjacent cells, preventing the passage of substances between them. Desmosomes are spot-like adhesions that anchor cells together, providing mechanical stability to tissues subjected to mechanical stress. Gap junctions are channels that allow for direct communication between adjacent cells, allowing for the exchange of ions and small molecules.

 

Extracellular Matrix

The extracellular matrix (ECM) is a complex network of proteins and carbohydrates that surrounds cells in tissues and provides structural support, mechanical strength, and signaling cues for cellular functions. The ECM is composed of various components, including fibrous proteins such as collagen and elastin, proteoglycans, glycoproteins, and other molecules. The ECM plays a crucial role in tissue development, maintenance, and repair, as well as cell behavior and function, including cell adhesion, migration, proliferation, and differentiation. 

 

The Cell


15 Nov 2012

Plastids: Diverse Membrane-Bound Organelles in Plant Cells with Specialized Functions

Plastids are vital, membrane-bound organelles found exclusively in plant cells. These specialized structures house pigments and perform a range of critical functions, from food storage to energy conversion through photosynthesis. Their ability to transform and adapt makes plastids one of the most dynamic components of plant biology.


Origin of Plastids: From Proplastids to Specialized Organelles

All plastids develop from a common precursor known as the proplastid. These are undifferentiated, immature plastids typically found in dividing cells of growing tissues like buds and root tips. Depending on the plant's developmental stage or environmental conditions, proplastids mature into one of three main types:

  • Leucoplasts – Colorless plastids used for storage
  • Chromoplasts – Pigment-rich plastids that produce red, orange, and yellow hues
  • Chloroplasts – Green plastids responsible for photosynthesis

Fascinatingly, even fully developed plastids can transform into other types if the plant's needs change, highlighting their adaptability.








Leucoplasts: Specialized for Food Storage

Leucoplasts are non-pigmented plastids, often located in the roots, tubers, and seeds of plants. Their primary role is to store nutrients, especially carbohydrates like starch. One subtype, the amyloplast, specializes in converting glucose into starch and storing it for later use by the plant. These plastids have various shapes, commonly tubular or triangular, and are crucial in energy reserve management.


Chromoplasts: The Source of Vibrant Plant Colors

Chromoplasts are responsible for the bright, non-green colors seen in petals, fruits, and some roots. They synthesize and store pigments such as carotenoids, which give plants red, yellow, and orange hues. These colors not only attract pollinators and animals for seed dispersal but also play roles in protecting plants from excessive light and oxidative stress.


Chloroplasts: Powerhouses of Photosynthesis

Chloroplasts are green plastids that serve as the primary sites for photosynthesis—the process through which plants capture sunlight and convert it into chemical energy. Chloroplasts develop from proplastids when plant cells are exposed to light, which activates pigment formation and structural differentiation.


Structure of a Chloroplast

Each chloroplast is enclosed by a double membrane. Inside, the thylakoid membranes are arranged in stacks called grana. Each granum consists of around 50 thylakoids, and a single chloroplast may contain hundreds of these stacks.

Within the thylakoids lies chlorophyll, the green pigment that captures light energy. Surrounding the thylakoids is the stroma, a fluid-filled space that hosts various enzymes and also contains chloroplast DNA, enabling these organelles to replicate and synthesize some of their own proteins.


How Photosynthesis Happens: Light-Dependent and Light-Independent Reactions

Photosynthesis takes place in two major stages:

  1. Light-dependent reactions
  2. Light-independent reactions (Calvin cycle)

Each stage occurs in a different part of the chloroplast and contributes to the overall conversion of solar energy into glucose.


Light-Dependent Reactions: Capturing Solar Energy

These reactions occur in the thylakoid membranes and require sunlight. Here's how they work:

  • Water molecules are split, and low-energy electrons are extracted.
  • Chlorophyll absorbs sunlight, energizing these electrons.
  • Energized electrons travel through an electron transport chain, generating ATP (energy molecule) and NADPH (a carrier of high-energy electrons).
  • Oxygen is released as a byproduct.

Light-Independent Reactions: Producing Glucose in the Stroma

Also called the Calvin cycle, these reactions occur in the stroma and do not require light. Instead, they use ATP and NADPH from the previous step to:

  • Convert carbon dioxide into glucose and other organic molecules.
  • Provide energy and raw materials for plant growth and development.

Key Insights to Remember

  • 🌱 Plastids are essential organelles found only in plant cells, each performing specific roles like storage, pigmentation, and energy production.
  • 🧬 All plastids originate from proplastids, which can mature into leucoplasts, chromoplasts, or chloroplasts depending on cellular needs.
  • 🍠 Leucoplasts store starch, primarily in non-green plant parts like roots and tubers.
  • 🌺 Chromoplasts produce vibrant pigments, aiding in reproduction by attracting pollinators.
  • 🌞 Chloroplasts drive photosynthesis, converting sunlight into chemical energy that fuels plant life.
  • Photosynthesis involves two stages, each vital for producing the sugars and energy plants need to grow and thrive.

Understanding plastids not only sheds light on plant function but also on how these structures support life on Earth by producing the oxygen and food we depend on.

23 Oct 2012

The Nucleus

The largest and most easily seen of all the organelles within a eukaryotic cell is the nucleus. The word “nucleus” is derived from the Greek word for a nut. A cell may be mononucleate, binucleate or multinucleate. In animal cells the nucleus is typically located in the central region. It controls all the activities of the cell. A typical nucleus is about 10 mille micron in diameter. Nucleus consists of nuclear membrane, nucleoplasm, nucleolus and chromosomes.

Nuclear membrane or nuclear envelope

A double membrane bounds the surface of the nucleus. The outer membrane is continuous with ER. It is believed that it has been formed by ER. It is covered with ribosomes. The nuclear membrane has many nuclear pores. The pores are embedded with many proteins, permitting certain molecules to pass into and out of the nucleus, i.e. nuclear pore allows exchange of substances between the nucleus and the cytoplasm.


                                       The Nucleus


Nucleoplasm

The fluid inside the nucleus is called nucleoplasm.

Nucleolus

The dark staining region in the nucleus is called nucleolus. (Plural: nucleoli). A cell may have one or more nucleoli. Nucleolus consists of ribosomal ribonucleic acid and some ribosomal proteins. It stores RNA synthesized by DNA. During nuclear division nucleoli seem to disappear. The rRNA and proteins make ribosomes. The partly assembled ribosomes move out through the nuclear pores into the cytoplasm where assembly is completed.

Chromatin and Chromosome

Chromatin (Chroma: color, and teino stretch) Looks grainy, but actually it is a threadlike material that undergoes coiling into rod like structures called chromosomes (Gk, Chroma, color, soma, body) just before cell division.

Chromosomes

Chromosomes are separate thread like structures in nucleus. During cell division they stain heavily, so they are visible only during cell division. At other times they lose their ability to stain. They maintain their structural integrity at all times. Each chromosome is bounded by delicate membrane. The centromere is a constriction functionally related to the movement of chromosomes during cell division. Each centromere has two plaques of proteins called kinetochores that are oriented on the opposite sides of the constriction. Each kinetochore forms the site of attachment for a single microtubule during cell division. E.M. studies reveal that chromosomes are composed of lengthwise microfibrils. Each species of animals and plants has a characteristic number of chromosome e.g. human 46, frog 26, chimpanzee 48 and fruit fly (Drosophila) 8. The number varies from 2 to 100 in other species. Individual chromosomes can be identified by their size and shape. Chemically chromosomes consist of DNA and histone proteins. DNA is the genetic material. It is transferred from one generation to the next.

Chromosome

Cytoplasmic Organelles and Membrane System

The protoplasm outside the nucleus is called cytoplasm. Various organelles are suspended within the fluid component of the cytoplasm called cytosol. Therefore, the term cytoplasm includes both, the cytosol and all the organelles other than the nucleus. Membranes have unique properties that enable membranous organelles to carry out a variety of functions. The membrane-bounded compartments allow certain cellular activities to be localized within specific enclosed regions of the cell.




21 Sept 2012

Structure of a Generalized Eukaryotic Cell

Cells are the basic building blocks of all living organisms. They serve as both the structural framework and the functional units that support life. While cells come in many shapes and sizes—each specialized for specific roles—scientists often refer to a "generalized cell" to better explain the shared features found in most cells. This model helps us understand the structure and function of a typical eukaryotic cell.

Core Characteristics of Most Cells

Despite their diversity, nearly all cells share four key features:

  1. Plasma Membrane – A flexible outer boundary that encloses the cell.
  2. Protoplasm – A jelly-like substance within the membrane that holds the cell’s internal components.
  3. Organelles – Specialized structures within the protoplasm that carry out essential cellular activities.
  4. Nucleus – The control center of the cell, containing DNA, the material responsible for heredity.

When viewed under a light or electron microscope, these elements form the visible architecture of a cell. The term ultrastructure refers to the fine details observed using an electron microscope.


Electron microscopic structure of a plant cell

Plasma Membrane: The Protective Barrier

The plasma membrane—also called the cell membrane—is the thin, elastic layer that surrounds every cell. It plays a critical role in maintaining the cell's shape and providing structural support. It also regulates the movement of substances in and out of the cell, ensuring a stable internal environment.

Composition of the Plasma Membrane

Chemically, the plasma membrane is primarily made up of:

  • Proteins (60–80%)
  • Lipids (20–40%)
  • Carbohydrates (in smaller amounts)

These components work together to create a flexible yet protective boundary that supports various cellular functions.

Electron microscopic structure of an animal cell

The Fluid Mosaic Model: A Modern View of Membrane Structure

In 1972, scientists S. Jonathan Singer and Garth Nicolson proposed the Fluid Mosaic Model, which remains the most widely accepted explanation of membrane structure today.

Key Insights from the Model

  • The membrane is made of a double layer of phospholipids, forming a flexible matrix.
  • Protein molecules are either partially embedded within or span completely across this lipid layer.
  • These proteins are scattered throughout the membrane in a random and dynamic pattern—hence the term mosaic.
  • The term fluid indicates that both lipids and proteins can move sideways within the layer, allowing the membrane to be flexible and adaptable.

This model explains how the membrane functions as a dynamic and responsive boundary, vital for communication, transport, and cellular interaction.


Key Takeaways for Better Understanding Cells

  • Cells may differ in form and function, but most share four common elements: a membrane, protoplasm, organelles, and a nucleus.
  • The plasma membrane acts as a gatekeeper, ensuring the cell maintains its shape while interacting with its environment.
  • Proteins and lipids are the major components of the cell membrane, each playing specific roles in cellular function.
  • The Fluid Mosaic Model provides a realistic picture of the cell membrane's structure, emphasizing its dynamic and functional nature.

These foundational insights into cell structure pave the way for a deeper understanding of how life operates at the microscopic level. Whether you're diving into cell biology for the first time or reinforcing your knowledge, grasping these concepts is key to exploring the complexities of living organisms.